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Kurzyna-Młynik, Renata; Banasiak, Łukasz; Piwczyński, Marcin; Trzeciak, Paulina; Daba Dinka, Mergi; Oskolski, Alexei. A.; Spalik, Krzysztof, 2025, "Phylogeography of Anthriscus sylvestris s.l.", https://doi.org/10.58132/WACYXJ, Dane Badawcze UW, V1
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Molecular data matrices and resulting phylogenetic trees for species of Anthriscus Pers. and outgroup Kozlovia Lipsky. Data matrices contain nucleotide sequences of (1) nuclear Internal Transcribed Spacer (nrITS), (2) nuclear single-copy waxy gene, and (3) three plastid intergenic spacers: rpoB-trnC, trnS-trnG, and psbA-trnH. The resulting phylogenetic trees were obtained using the Maximum Likelihood principle implemented in RAxML and Bayesian Inference utilising MrBayes (topological inference) and BEAST (molecular dating). ML trees are provided with bootstrap support for internal nodes, whereas Bayesian trees have an estimate of a posterior probability for each clade. Trees obtained with MrBayes were summarized as 50% majority rule consensus trees and those obtained in BEAST as Maximum Clade Credibility Trees with median heights for internal nodes.
Note: clusters of identical sequences were identified in the matrices, and single representatives were kept before calculating the phylogenetic trees. Thus, the trees contain less OTU than listed in the matrices.
Anthriscus sect. Cacosciadium, phylogeography, ring species
CC0 Creative Commons Zero 1.0
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